BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E12SP1|AL428078
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1960 0.0
>3x_Contig1802
Length = 45229
Score = 1960 bits (985), Expect = 0.0
Identities = 998/1005 (99%), Gaps = 1/1005 (0%)
Strand = Plus / Minus
Query: 1 gatctctcctacggcaaccaaccaagcattccatgtacataaccgaagtaaatkatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5236 gatctctcctacggcaaccaaccaagcattccatgtacataaccgaagtaaattatatat 5177
Query: 61 aaatggatatatatatatatgcsaaatcttgcttactgaagaaaccaaacaggaaatttt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5176 aaatggatatatatatatatgccaaatcttgcttactgaagaaaccaaacaggaaatttt 5117
Query: 121 tggtacattagaagtggcataacacaactgaaatcccgaggtttaccatcgactgakctg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5116 tggtacattagaagtggcataacacaactgaaatcccgaggtttaccatcgactgatctg 5057
Query: 181 aagagtcaaaattaagttgctagtgtgtattcctctctcaatcaccaattgctcatcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5056 aagagtcaaaattaagttgctagtgtgtattcctctctcaatcaccaattgctcatcgca 4997
Query: 241 tgaactaaatcatttctttttttcgcatagaccaaaagaaattcatctcgaaggcatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4996 tgaactaaatcatttctttttttcgcatagaccaaaagaaattcatctcgaaggcatctt 4937
Query: 301 ccgacactttaacagtccgggtaataatatttctttttctttagccacagcgctgaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4936 ccgacactttaacagtccgggtaataatatttctttttctttagccacagcgctgaaagc 4877
Query: 361 atagattgaggggcacgggtgttatggcacaagcactcttcctgatcttttcggaatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4876 atagattgaggggcacgggtgttatggcacaagcactcttcctgatcttttcggaatgct 4817
Query: 421 ctacagtttcagtagtgattttgtgatcacatgacttttcctgacaaacgacagcgtcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4816 ctacagtttcagtagtgattttgtgatcacatgacttttcctgacaaacgacagcgtcgg 4757
Query: 481 cgacggtgacaacaatgaatgtgtagatttcttagctataaaggtagaaagcgatagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4756 cgacggtgacaacaatgaatgtgtagatttcttagctataaaggtagaaagcgatagata 4697
Query: 541 tatcctacatctattatagaaaataagtgccattggttgtagagagccagacaaatttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4696 tatcctacatctattatagaaaataagtgccattggttgtagagagccagacaaatttat 4637
Query: 601 gagcatagttatgtatcatataararaagtttataagtgtctcaaagtaaggttttgaat 660
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 4636 gagcatagttatgtatcatataaaaaaagtttataagtgtctcaaagtaaggttttgaat 4577
Query: 661 ttgtttataatttatcatttgaattcttgactgtttgtatgcgtaacatagtttcacgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4576 ttgtttataatttatcatttgaattcttgactgtttgtatgcgtaacatagtttcacgcc 4517
Query: 721 caaactgcaaggttcggattcgtttcatgaatccggatttttgatcactaattgctggta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4516 caaactgcaaggttcggattcgtttcatgaatccggatttttgatcactaattgctggta 4457
Query: 781 acacgaactggaaaaattgaatagttttgaagatacagatagccggtacaaacaggaaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 acacgaactggaaaaattgaatagttttgaagatacagatagccggtacaaacaggaaac 4397
Query: 841 ctgtttgatagtgattccttttatctattatcaggccggacgaatctagattaatagaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4396 ctgtttgatagtgattccttttatctattatcaggccggacgaatctagattaatagaga 4337
Query: 901 tcccaacacacaggctgctgcaaacaaaccagaagatgaagcaagttgcttgacaccagc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 tcccaacacacaggctgctgcaaacaaaccagaagatgaagcaagttgcttgacaccagc 4277
Query: 961 tccagcgtaagtrcttagagcctgagtggatgaagc-gctgttgt 1004
|||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 4276 tccagcgtaagtacttagagcctgagtggatgaagcagctgttgt 4232
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,249
Number of Sequences: 1807
Number of extensions: 11249
Number of successful extensions: 206
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)